Registration: Edges

Edges of MNI template ovelaid on registered T1 image.

CLI

nifti_overlay -A registered_t1.nii.gz -E mni.nii.gz --sigma 3

Python

from nifti_overlay import NiftiOverlay

overlay = NiftiOverlay()
overlay.add_anat('registered_t1.nii.gz')
overlay.add_edges('mni.nii.gz', sigma=3)
overlay.plot()